FastQCFastQC Report
Wed 31 May 2023
EGAF00007943502

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007943502
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences526660
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT33050.6275395891087229No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG15500.2943075228800364No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10230.19424296510082406No Hit
GATGAACGTAAACGCCACACCAAAATCCACC7420.14088785933999162No Hit
ATGGACGAACTGCAGCCGACCATGCAACTGA6580.12493829035810579No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6210.1179128849732275No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC5860.11126723123077507No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5470.10386207420347093No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5430.10310257091861923No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5420.10291269509740629No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)