FastQCFastQC Report
Sun 21 May 2023
EGAF00007943551

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007943551
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences465963
Sequences flagged as poor quality0
Sequence length44
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AACCGCCGGCGGGCCGGTATCGCTTGGGGATACGGTTGGCGGTG43740.9387011415069436No Hit
CGGCGCACCGTGGTTGATCGGCTGGGTCAGCGGCAGGTCGAAGT19180.41162066516010926No Hit
AGAACTGAGCCTTCACTGGTTCAGCTCCCTCGGTCGAGTACGCT16340.35067161984964473No Hit
GGCGCCCGCGGTTCAACCAATGGTAACACAAGAACTGAGCCTTC15620.3352197492075551No Hit
CGAGATGTTTCCATCCAGAGGTCTCCGCAGCGGAAAAAATTGGC12210.2620379729721029No Hit
CAGCTCGTCTTCGTCGCCCGCTTCATCTTCGTTGTGCAGCGGGG11840.25409742833658466No Hit
CTGAACAACATCGGTACCCTGAGAAGGCGGTGCGCCCTGAAACA11820.25366820970763776No Hit
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT9240.1982990065734833No Hit
GAAGATGTAATCCCAGGACTCATCCAGGTCAGCCGGATCGATAG8990.19293377371164663No Hit
ATACGGATAAGAACTACGGGCAGTGGCTGTAACCCTCTTAACCG8810.18907080605112422No Hit
GACCGGCCATTCCGGGGTGCGCGGACGTGGACGACCGTGAATAG8370.1796279962142917No Hit
AACCCTCTTAACCGCTGTATCGGCGAGAAGCTCTTCTGAGGGGC7980.17125823294982648No Hit
CACAGCCGGCGGACCGGTATCAGACGGAGAGACGGTCGGTGGCG7570.16245925105641434No Hit
GATTTCCGGGGTTTTGACAGAACGCAGCAGGTCAGCGATGGCCG7530.16160081379852048No Hit
ACCGTCTTTGTTCGGCACCTGGGTGTAGTTGGTGTTACGACGTT7460.1600985485972062No Hit
TGGCAGGTCCGGCTGCGGCGGCAGCATTGGACGCGCCGGGGCGG6800.14593433384195742No Hit
CAGGTCATCTTCGTCCGCATCGCCGTCTTTGTTCGGCACCTGGG5700.12232730924987606No Hit
TGCCGCCAGTTCAGATGCGCTCAGATCGGATTTCGGGATATAGT5310.11395754598541087No Hit
TTGTGGCACCGGTGGCAGCAGGGTGGCCATGACACGCTGTTCCA5170.11095301558278231No Hit
AGTCGGACCCTGCTGGCCTGCCGGCGCACGCAGTGCCAGCTGCA5160.11073840626830886No Hit

[OK]Adapter Content

Adapter graph