FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007943594

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007943594
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences502772
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG31230.6211563094205724No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT18780.3735291543681828No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA8450.16806822973435276No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC7150.1422115790059908No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5820.11575823633774354No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)