FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007943666

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007943666
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences510292
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT18360.3597940002978687No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG12970.25416820173547694No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA11510.22555713199501462No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC5640.11052495433986816No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA5160.10111857524711342No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)