FastQCFastQC Report
Wed 31 May 2023
EGAF00007943700

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007943700
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences423443
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG44031.0398093722177484No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT7740.18278729368533664No Hit
TTCGATGCACTGCCGAAAAAGAAATCCCGTA5770.13626391273441762No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5640.1331938419102453No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5390.12728985955606775No Hit
TTCGACGCCCTGCCGAAGAAAAAATCTCGCA4720.11146718684687194No Hit
CGTCGCCAGCGTGCAATCGACAAACGCCAGC4680.11052254967020354No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)