FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007943704

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007943704
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences384388
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG39521.0281278291726068No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT7490.1948551983932901No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA6550.17040074091803076No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA5990.1558321279540464No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG5370.13970259217249237No Hit
GTGGCACAGTCCCAGTACTTCGACCTGCCGC5360.13944243836956408No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)