FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007943706

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007943706
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences387173
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG38761.0011028661606054No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA9370.2420106773974425No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT7290.1882879229698352No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA3880.10021359960534439No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)