FastQCFastQC Report
Wed 31 May 2023
EGAF00007943842

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007943842
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences512204
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT51551.0064349360801557No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG48900.9546977376201671No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT15820.30886131307057346No Hit
TCTAACAGCGTAAACGGTTCTTCCCAGGCCG12580.24560526665156854No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8760.17102560698471703No Hit
CGCGCTGCGGAAGTACAGGCGGACTACGCTT8340.16282574911558675No Hit
CTGCCGCAGTCTCCAGGCCCAGCGTTCCCGC6800.13275960359544245No Hit
GATGGCGAACACCTGGAAGGTGGCGACGGCA6330.12358357217046334No Hit
TTCAAATACACTGTCGGTGAAGCCCCAGAAG5880.11479801016782375No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5850.11421230603431444No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)