FastQCFastQC Report
Sun 21 May 2023
EGAF00007943860

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007943860
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences463274
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG44830.9676778752962609No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT13110.28298587876720904No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC9630.20786834573060434No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8680.18736212263153124No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6550.14138501189360939No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT5510.11893609397462408No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)