FastQCFastQC Report
Sun 21 May 2023
EGAF00007943902

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007943902
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences594267
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT76191.2820836425377817No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG48920.8231989997761948No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT18320.30827893859157585No Hit
CGTGAACGCCAGAAACGTGTTGACGATGAGG10600.1783710015868288No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6630.11156601325666746No Hit
CAGACCCCGGAACAGAGCACCCCGTCCCGCA6370.10719087548189618No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC6040.10163781599853265No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)