FastQCFastQC Report
Wed 31 May 2023
EGAF00007943986

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007943986
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences435413
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG61341.4087774136279807No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT41010.9418643908197504No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT12330.2831794181616075No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA6720.1543362279031632No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC6590.15135055682765558No Hit
AGCGGTGACTGTGGCGGCATCCTGCGCTGCC4570.1049578216543833No Hit
CGTCGTGAACACGGTGGCCACGACGATGATC4560.10472815464857503No Hit
CAGGAAACCGTTACCACCCAAGAGCCAGTTA4360.10013481453240945No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)