FastQCFastQC Report
Sun 21 May 2023
EGAF00007944020

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007944020
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences515816
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTCGCCACACCCAGAAAGCACCGAAACGTA34820.6750469159545265No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT19480.3776540471796144No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA16590.32162631636087285No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA15590.30223955829210414No Hit
GTCCACATCAAACTGCCGAAGCTGGCTGCAA13040.252803325216744No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11080.2148052794019573No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10070.1952246537525009No Hit
AGCGTGCACATCAAGATCCCGAAAGTTTCCC8370.1622671650355941No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA8180.15858368100252804No Hit
TCCTACACCAACGGCAAACTGACTATCACCC7820.1516044480977713No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7700.14927803712951906No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG7680.14889030196814368No Hit
GCTCTGGTCTCCGCCATGGAACGCACCGAAC7670.148696434387456No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC7580.1469516261612668No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG7010.13590117406206864No Hit
GTTCTGGTTAACGAAGGTAACGGTTATGTGG6350.12310591373668131No Hit
CAGGGCCGTTATACTACCAACGACGGTTACG6160.11942242970361525No Hit
CACGAAGCTCCGAACATGACCCAGACCGGTA5700.11050452099198163No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG5670.10992291824991858No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA5650.10953518308854321No Hit
GCACTGGTAAGCGCTATGGAACGTACTGAAC5180.10042340679622191No Hit

[OK]Adapter Content

Adapter graph