FastQCFastQC Report
Wed 31 May 2023
EGAF00007944024

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007944024
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences466570
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTCGCCACACCCAGAAAGCACCGAAACGTA15320.3283537304155861No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT14690.3148509334076345No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG8910.190968129112459No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA7030.15067406819984142No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6540.14017189274921235No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA6240.1337419894120925No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG5050.10823670617485051No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)