FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007944040

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007944040
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences466332
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9190.19706989869878114No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG8830.1893500767693403No Hit
CCGAACGGTGGTACCCTGACTAACCTGCTGG7720.16554729248689776No Hit
GGCGTTCAGAAACGCGCAAGCGTTACCGGTT7710.16533285298885772No Hit
CTGGGCTGGAAAGCTGGTATCCTGACCGGTT5180.1110796599847319No Hit
TCCGAAAAATCTGAAAAATCTGACCGTAAAA5080.10893526500433168No Hit
GACGAGGCCACCAACGCAGAAATGGACCGTG4910.10528979353765129No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)