FastQCFastQC Report
Wed 31 May 2023
EGAF00007944096

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007944096
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences511206
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG47810.9352394142478767No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT22560.4413093743031185No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8240.16118746650078442No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG7690.15042859434357186No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5620.1099361118609719No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5490.10739310571472166No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)