FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007944120

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007944120
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences400329
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT48051.200262783860275No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG33720.8423072023260867No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT25490.6367262926243165No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAG9950.24854557126763238No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA8390.20957762240557143No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC8280.20682988242170813No Hit
GACCCAGCTATCGTTCAGCCGAAAGCAGCAA7500.18734590799067766No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG6850.1711092626314856No Hit
TACCAGGTTGGCATCGACGGCTCTAACCTGG6360.15886932997609468No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG6270.15662117908020654No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG6200.15487261727229354No Hit
GCTTCCGAACCGGAGGACAAATCTCCGCGCG5920.14787837004064158No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG5560.13888576645708903No Hit
GCGCAGGGTCGCTACACTACCGACGACGGCT5070.1266458338016981No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA4930.12314871018587212No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG4920.12289891564188456No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATG4890.12214953200992183No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA4720.11790302476213314No Hit
CAGAAACAGCTGCTGCAGGGCGATGTGGAAG4540.11340672297035688No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC4340.10841083209060548No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC4330.10816103754661789No Hit
CAGGGCCGTTATACTACCAACGACGGTTACG4210.10516350301876708No Hit
CAGGGTGCTCTGACTCTGTCTCTGCCGAAAC4020.10041740668300322No Hit

[OK]Adapter Content

Adapter graph