FastQCFastQC Report
Sun 21 May 2023
EGAF00007944124

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007944124
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences450175
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG12690.2818903759649025No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9360.20791914255567281No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT8360.1857055589492975No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA6710.14905314599877825No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)