FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007944129

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007944129
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences478837
Sequences flagged as poor quality0
Sequence length41
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGT12780.2668966683861105No Hit
CAAAGTGTCGGCACGTACGATGTAATCGCGTTTCCCCAGTA10970.22909674899809332No Hit
ATCGGTGCAGGATTGCGTAATTTAGTAGCGCCGTCCGTAAG9710.20278299296002605No Hit
GTCGCTTGGACGAGTCGGCAGGGTTGCGCCGGTTTCGTTGG5100.10650806015408167No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)