FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007944136

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007944136
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences493669
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG20490.41505543187844485No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT13340.27022154520539066No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC13320.26981641545245905No Hit
ACCGAACCTACTACTGATTACGGCGGTGACTCC6920.14017489451434056No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT6700.13571846723209277No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5920.11991840686775958No Hit
CTGGAACGTCCGGTGTACCCGAAACCGGTTCGT5340.10816964403274258No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTATC5230.10594143039161867No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAACTG4980.10087730847997342No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)