FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007944156

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007944156
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences462616
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20900.45177858093969947No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG9480.20492157642623687No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT9000.19454580040465524No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTGAG7970.1722811143583447No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGTTC6120.13229114427516558No Hit
GTGGCACAGTCCCAGTACTTCGACCTGCCGCTG5930.12818406626662285No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCAGC5240.11326888823559929No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)