FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007944188

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007944188
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences477709
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG17950.3757517651959666No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT8420.17625793108356763No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTGAG6980.14611405688400259No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC6090.12748346796899368No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGATG6050.12664613813011688No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCGAA5260.11010887381229996No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5110.10696888691651193No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCGAA4900.10257290526240871No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)