FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007944215

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007944215
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences460837
Sequences flagged as poor quality0
Sequence length44
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT6410.13909473414678075No Hit
CGGCGGAACCGGGACAGTAGCCTGCGCGGTGGTCACCGGTGGGG5770.12520696037861542No Hit
GACGGTCTGGATAGCCGCGTCTACGGTGGACACCGGCGGCGGGG4900.10632826791251569No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)