FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007944230

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007944230
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences464108
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG29310.6315340394908082No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG13080.2818309531402174No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG11470.24714075172158206No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7480.16116938298844236No Hit
TCTGGCGCTGGCACCTCTTCTGCCTCTTCCG6750.14544028545080023No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6440.13876080567454127No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)