FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007944246

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007944246
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences508114
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT31030.6106897271084835No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30770.605572765166872No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC16690.32846959540575543No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG16200.3188260902081029No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11720.2306568998295658No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT11380.2239654880597661No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC10650.20959863337754914No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA10110.19897109703727903No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT9890.1946413600097616No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA9340.18381701744096798No Hit
GGTCGTCAGGGCTCCGATGTCGAACTGGAAT8420.16571084441680412No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC8190.16118430116076313No Hit
GGTCGTCAGGGCAGCGACGTAGAACTGGAAT8150.16039707624666907No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG7730.1521312146486812No Hit
ATGTCCAACATGGACATCGATGGTATTAACA7720.15193440842015768No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG6830.1344186540815644No Hit
CCGGTAGGCGAGGCGGACTATTTCGAATACC6270.12339750528424724No Hit
GGTTCCCGTGAACGCGCACGTGGTCGTGGCC6090.11985499317082388No Hit
GTGGCACAGTCCCAGTACTTCGACCTGCCGC5950.11709970597149459No Hit
GGCCGTCGTCCGTTCTTCCACCCGGTTGGTG5640.11099871288726545No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG5510.10844023191645968No Hit
GGTCGTCAGGGCTCCGACGTCGAGCTGGAAA5310.10450410734598929No Hit
CCGGATCCGGCTGTTGCCCCGACCAGCGCGG5250.10332326997484817No Hit

[OK]Adapter Content

Adapter graph