FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007944248

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007944248
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences500205
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG71661.432612628822183No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC9180.1835247548505113No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT6880.13754360712108035No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6560.13114623004568127No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6470.1293469677432253No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAG5330.10655631191211602No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5210.10415729550884137No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)