FastQCFastQC Report
Wed 31 May 2023
EGAF00007944263

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007944263
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences434633
Sequences flagged as poor quality0
Sequence length44
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT7500.17255937768186033No Hit
CCACAGATCGTCGAAGATGTCGTTGCGACGACGGCAATCACGCG5300.12194196022851463No Hit
GCGGACGGACATCTGAGACGGGGAACGCGGTGGGTTCGGGGTCC5150.11849077267487743No Hit
ACCCTGACCACGCGGACCGGTGGAAGGACCTTCGCCCGGATCAT4840.11135831839736053No Hit
CGGCGCACCGTGGTTGATCGGCTGGGTCAGCGGCAGGTCGAAGT4660.10721689333299587No Hit
CGGCGGAACCGGGACAGTAGCCTGCGCGGTGGTCACCGGTGGGG4550.1046860224603286No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)