FastQCFastQC Report
Sun 21 May 2023
EGAF00007944264

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007944264
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences434633
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG19870.45716731127180865No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7530.17324961519258777No Hit
CTGGAACGTCCGGTGTACCCGAAACCGGTTC5170.11895093101536237No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG5120.11780053516414997No Hit
GCCCTGATGCAGGCATACGGCGGCGGTGGTT4780.10997784337590565No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA4610.10606649748178347No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT4540.10445594329008612No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC4520.10399578494960116No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)