FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007944278

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007944278
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences466083
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG51821.1118191395094865No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG7130.1529770448611084No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5860.12572867922666134No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT4950.1062042597563095No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)