FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007944288

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007944288
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences446125
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG49661.1131409358363689No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT14100.3160549173437938No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6940.15556178201176799No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT5930.13292238722331184No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5900.1322499299523676No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5870.13157747268142336No Hit
GACCCAGCTATCGTTCAGCCGAAAGCAGCAA4730.10602409638554218No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)