FastQCFastQC Report
Wed 31 May 2023
EGAF00007944370

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007944370
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences437649
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG34900.7974426995149081No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8330.19033517727676744No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7600.17365514373390548No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6590.15057728910611015No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA5360.1224725750544386No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG4560.10419308624034329No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG4400.10053718847752424No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)