FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007944372

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007944372
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences445788
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG35790.8028479905246441No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT15640.3508394124561451No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7440.16689547497913806No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG7010.15724963435534378No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA6800.15253887498093263No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG5950.13347151560831608No Hit
ACTCTGACCGGTAAAGTTGAGGATAACCACG4600.1031880624871015No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC4500.10094484373738191No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)