FastQCFastQC Report
Wed 31 May 2023
EGAF00007944412

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007944412
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences414729
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG35070.8456124360727126No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT29050.7004574071260993No Hit
ATGATGGACCCGAACTCTACCAGCGAAGACG15990.38555297555753276No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA14060.33901656262282115No Hit
CAGAACCTGACCCTGCGTATCCAGGTTTCTA9930.23943346136874924No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG9410.22689515322053677No Hit
GCGACCGGTCTGGCGTTCCGCACTCCGAACC8670.20905217624038833No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC8250.19892508119760136No Hit
ATTGCTGCCGTTGGCTCTCCAGTGAAGTCTA7220.174089586211719No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA6860.16540921903218728No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6290.1516653043312621No Hit
GGCACTTCCGCTTTCGGTGATTCCGCGGACC6130.14780736336258135No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA6020.14515502894661333No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG5540.13358120604057105No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA5510.13285784210894344No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATC5400.1302055076929754No Hit
GGTTACCAGGAACCGCCGGCACCACAGGCGC5300.12779429458754996No Hit
GACGGTCCGTACGCACCGTTCCCGCCTCGCC5170.12465971755049683No Hit
ACCGCGTCCGGTGAAGAAGTAGCAGTTCTGA4930.11887280609747569No Hit
CTGCGTGTCTGCGCTGCGCTGTCCATCCCGA4450.10729898319143344No Hit
GCACCGCCGGGCTCTCCGGCCCCACCGCCGC4320.10416440615438033No Hit
TCTATCCTGAAACCAGGTGCTTCTGCTGCCC4310.10392328484383778No Hit
ACCGCATCCGGTGAAGAAGTAGCTGTTCTGT4290.1034410422227527No Hit

[OK]Adapter Content

Adapter graph