FastQCFastQC Report
Sun 21 May 2023
EGAF00007944444

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007944444
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences451836
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG67561.4952327835763417No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT7530.16665338751228323No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7510.16621074903283492No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG7020.1553661062863517No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA6250.13832452482759233No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT5120.11331545073876362No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA4570.10114289255393549No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)