FastQCFastQC Report
Wed 31 May 2023
EGAF00007944469

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007944469
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences494315
Sequences flagged as poor quality0
Sequence length44
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT8460.17114592921517655No Hit
ATCGCCCGGAACTACCTGGCTAGTGTGACCGGTCTCGGCAGCGG5660.11450188644892426No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)