FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007944476

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007944476
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences504699
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30180.5979801822472405No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT20870.4135137973326676No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT18020.3570444958282065No Hit
CGTGAACGCCAGAAACGTGTTGACGATGAGG12600.24965375401972265No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA11280.22349955121765647No Hit
CTGAAGGCGACCACCACCCACCTGTTCGAAG11010.21814982791723386No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC9300.1842682470145572No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG8350.16544514651307016No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG8180.16207680221280407No Hit
GGTTACCAGGAACCGCCGGCACCACAGGCGC7970.15791590631247535No Hit
ACCGCGTCCGGTGAAGAAGTAGCAGTTCTGA7890.15633080311235015No Hit
ACCGCATCCGGTGAAGAAGTAGCTGTTCTGT7830.1551419757122562No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATC7700.15256618301205271No Hit
ACCGCATCCGGTGAAGAAGTTGCGGTACTGA7580.15018852821186487No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7320.1450369428114579No Hit
CAGCGCGGTGATCCGTTCGACAAAAACTACG7080.14028163321108225No Hit
TCTGGCGCTGGCACCTCTTCTGCCTCTTCCG7040.13948908161101964No Hit
CAGGGCCGTTATACTACCAACGACGGTTACG6360.12601570440995524No Hit
GGCTACCAGGAACCACCGGCACCACAAGCCC6310.125025014909877No Hit
ACTAGCCCGGAAGAACCGATCTACACCCAGG6300.12482687700986132No Hit
GCCGTCCGTTATTTCCGCGGCCGCGGCTCCG5160.10223915640807689No Hit

[OK]Adapter Content

Adapter graph