FastQCFastQC Report
Wed 31 May 2023
EGAF00007944478

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007944478
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences464159
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG64591.391549016608533No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT21690.4672967668406731No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT15990.3444940203680204No Hit
CGTGAACGCCAGAAACGTGTTGACGATGAGG10890.23461787878722593No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA10150.2186750660872675No Hit
CTGAAGGCGACCACCACCCACCTGTTCGAAG9580.20639479144000222No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC8990.19368362996300836No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG7720.16632231627524188No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG7570.16309066505227734No Hit
ACCGCGTCCGGTGAAGAAGTAGCAGTTCTGA7540.16244433480768444No Hit
GGTTACCAGGAACCGCCGGCACCACAGGCGC7180.15468837187256954No Hit
ACCGCATCCGGTGAAGAAGTAGCTGTTCTGT6970.15016406016041917No Hit
CAGCGCGGTGATCCGTTCGACAAAAACTACG6970.15016406016041917No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATC6840.14736329576718324No Hit
ACCGCATCCGGTGAAGAAGTTGCGGTACTGA6770.14585519186313312No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6210.13379036063073216No Hit
ACTAGCCCGGAAGAACCGATCTACACCCAGG6010.12948149233344608No Hit
TCTGGCGCTGGCACCTCTTCTGCCTCTTCCG5970.1286197186739889No Hit
CAGGGCCGTTATACTACCAACGACGGTTACG5940.12797338842939596No Hit
GGCTACCAGGAACCACCGGCACCACAAGCCC5890.12689617135507444No Hit
GCCGTCCGTTATTTCCGCGGCCGCGGCTCCG4700.10125840498622239No Hit

[OK]Adapter Content

Adapter graph