FastQCFastQC Report
Wed 31 May 2023
EGAF00007944495

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007944495
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences467953
Sequences flagged as poor quality0
Sequence length44
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT11490.24553747919128632No Hit
TGCCGCCAGTTCAGATGCGCTCAGATCGGATTTCGGGATATAGT6510.13911653520759562No Hit
TTCCGGGTGGATGTGACCGTGATGGTCGTGATCGTGATCATGGT5970.12757691477562919No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)