FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007944502

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007944502
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences496031
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30740.6197193320578753No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT17220.3471557221222061No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT15760.31772207785400514No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC11460.23103394747505698No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG11340.22861474383657474No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG10400.20966431533513025No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA9960.20079390199402858No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC6400.12902419405238785No Hit
CTGAAGGCGACCACCACCCACCTGTTCGAAG6330.12761299192993986No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6070.12237138404656162No Hit
CAGGGCCGTTATACTACCAACGACGGTTACG5320.10725136130604741No Hit

[OK]Adapter Content

Adapter graph