FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007944504

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007944504
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences487275
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT15590.31994253758144786No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11630.2386742599148325No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8310.17054024934585194No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5380.1104099327894926No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC4990.10240623877687137No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG4930.1011749012364681No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)