FastQCFastQC Report
Wed 31 May 2023
EGAF00007944510

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007944510
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences506692
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG12240.2415668690249698No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT7350.14505853654685688No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG7010.1383483457406077No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6820.1345985332312332No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA5660.11170494106873603No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)