FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007944511

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007944511
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences472506
Sequences flagged as poor quality0
Sequence length44
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCCTGACCACGCGGACCGGTGGAAGGACCTTCGCCCGGATCAT8800.18624102127803668No Hit
CGGACCTTCGCCCGGGTCATCTGCCGGGCCCTGTTCGATGGCAC6930.14666480425645387No Hit
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT6470.13692947814419287No Hit
GGAATGACGCAGGATCGCGCAGCCTACGGTGTCGGTGCGATCCT5480.11597736325041376No Hit
AGAACTGAGCCTTCACTGGTTCAGCTCCCTCGGTCGAGTACGCT5250.11110970019428325No Hit
GGTGGATGGGCCTTCACCAGGATCGTCAGCCGGGCCCTGCTCGA5140.1087816874283078No Hit
CATATCCGGTTCACCGTCCGGGCCACCTTCCTGGTGATATTCGA4910.10391402437217728No Hit

[OK]Adapter Content

Adapter graph