FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007944514

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007944514
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences546795
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG13760.2516482411141287No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6360.11631415795682111No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG5690.10406093691420003No Hit
ATGTCCAACATGGACATCGATGGTATTAACA5530.10113479457566363No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)