FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007944528

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007944528
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences467797
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG47081.0064194511721964No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT13320.28473889315237166No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA8170.17464840518430003No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAG4960.10602889714983207No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)