FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007944540

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007944540
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences427650
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTCGCCACACCCAGAAAGCACCGAAACGTA14640.3423360224482638No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9800.22915935928913833No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA7140.16695896176780076No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6640.15526715772243657No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA6260.14638138664795977No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG5030.11761954869636386No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)