FastQCFastQC Report
Sun 21 May 2023
EGAF00007944544

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007944544
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences426335
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10640.24956900090304573No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA5200.12196981247141334No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5110.11985879648633117No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC4350.10203243927897077No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)