FastQCFastQC Report
Wed 31 May 2023
EGAF00007944566

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007944566
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences276789
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG29281.0578455068662411No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC3490.12608882578426164No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG3440.12428239561543271No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG3120.11272124253492732No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)