FastQCFastQC Report
Wed 31 May 2023
EGAF00007946350

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007946350
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences538617
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG42870.7959273472615978No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA6430.11937981905509852No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5920.10991112423113268No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5840.10842583876854982No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)