FastQCFastQC Report
Wed 31 May 2023
EGAF00007946410

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007946410
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences577344
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT20410.3535154084912981No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10820.1874099323800022No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA7890.1366602926504822No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7770.13458180911207182No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG5930.1027117281897794No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)