FastQCFastQC Report
Sun 21 May 2023
EGAF00007946496

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007946496
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences504417
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT28270.5604489935906205No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT14950.29638176350123013No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG14160.28072011847340594No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC11640.23076145332135914No Hit
GGTCGTCAGGGCTCCGATGTCGAACTGGAAT6690.13262836105841003No Hit
GGTCGTCAGGGCAGCGACGTAGAACTGGAAT6570.13024937700355063No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6050.11994044609916002No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)