FastQCFastQC Report
Wed 31 May 2023
EGAF00007946504

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007946504
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences498767
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG42100.8440815049913085No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA12110.24279874169702487No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5670.11368033570785557No Hit
GCTCTGGTCTCCGCCATGGAACGCACCGAAC4990.1000467151996824No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)